genui.maps.genuimodels package

Submodules

genui.maps.genuimodels.algorithms module

algorithms

Created by: Martin Sicho On: 25-02-20, 15:13

class genui.maps.genuimodels.algorithms.MapAlgorithm(builder, callback=None)[source]

Bases: Algorithm, ABC

abstract fit(X: DataFrame, y=None)[source]

classmethod getModes()[source]

abstract getPoints(mols, X: DataFrame) → [<class 'genui.maps.models.Point'>][source]

abstract predict(X: DataFrame) → DataFrame[source]

class genui.maps.genuimodels.algorithms.TSNE(builder, callback=None)[source]

Bases: MapAlgorithm

fit(X: DataFrame, y: Optional[Series] = None)[source]

getPoints(mols, X=None) → [<class 'genui.maps.models.Point'>][source]

getSerializer()[source]

property model

name = 'TSNE'

parameters = {'early_exaggeration': {'defaultValue': 12, 'type': 'integer'}, 'early_exaggeration_iter': {'defaultValue': 250, 'type': 'integer'}, 'exaggeration': {'defaultValue': 0, 'type': 'integer'}, 'n_iter': {'defaultValue': 500, 'type': 'integer'}, 'perplexity': {'defaultValue': 30, 'type': 'integer'}}

predict(X: DataFrame)[source]

genui.maps.genuimodels.builders module

builders

Created by: Martin Sicho On: 25-02-20, 15:13

class genui.maps.genuimodels.builders.MapBuilder(instance: Map, progress=None, onFit=None)[source]

Bases: DescriptorBuilderMixIn, PredictionMixIn, ProgressMixIn, ModelBuilder

build() → Model[source]

property corePackage

getPoints()[source]

getX() → DataFrame[source]

getY() → Series[source]

Module contents

__init__.py

Created by: Martin Sicho On: 25-02-20, 15:12